**************************************************** Run Stamp start time Sat Apr 26 09:58:47 2008 machine name 3dma.ams.sunysb.edu operating system Linux **************************************************** Input Data Options simulated data (0) tomographic data (1) segmented data (2) burn data (3) medial axis data (4) Enter choice: 1 Data Processing Options plot image (1) resize tomographic data (2) rotate tomographic data (3) histogram data, porosity/thresh dependence (4) histogram data binormal fit (5) generate circular fiducial polygon (6) segment data (7) image magnification (8) image refining by trilinear interpolation (9) Enter choice: 1 Image format options Rasterfile (2D) (1) Inventor (3D) (2) Enter choice: 1 Reading raw tomographic data files Tomographic data slices are contained in separate files (slc) a single file (vol) Enter file type (slc,vol): slc Recognized tomographic data file types are ascii integer array ( ai) binary integer array ( bi) swapped binary integer array ( sbi) binary short integer array ( bs) swapped binary short array ( sbs) binary unsigned char array ( ubc) netcdf files ( nc) netcdf ascii files ( na) punch ascii files ( pa) sun rasterfile ( 8-bit color) ( sr8) sun rasterfile (24-bit color) (sr24) bmp ( bmp) tiff file (tiff) Enter data type (ai,bi,sbi,bs,sbs,ubc,nc,na,pa,sr8,sr24,bmp,tiff): bi Files assumed to be labelled basename.ext, basename is limited to 255 characters maximum, ext is a numerical designator lying between 000 and 999 It is assumed that the files have consecutively numbered extensions ie. 000 -> 056, or 021 -> 049 Enter basename for tomographic file(s): ../tom_rot/fbr Are file(s) compressed? [y,n]: y Enter first and last slice of data to use: 1 10 Slice size of data, (nx,ny): 291 5 Select method for determining MIN and MAX values for scaling data volume (v) slice (s) slice adjusted (sa) Enter choice: v Set global min and max from files? (if the answer is not yes, you will be asked to enter the values) (y,n(dflt)): y Fiducial polygon generation NONE (N) MANUALLY set (M) Enter method: N Enter basename for raster file(s): ../tom_rot/fbr Rasterfile colormap choices rainbow (r) greyscale with void white (gv) greyscale with material white (gm) pinkscale with void pale (pv) pinkscale with material pale (pm) Enter choice (r,gv(dflt),gm,pv,pm): gv Merge raster files of tomographic image (y,n(dflt)): n