Input Data Options
	tomographic data (1)
	segmented data (2)
	burn data (3)
	medial axis data (4)
	throat data (5)
	pore-throat network data (6)
	fluid data (7)
	lattice Boltzmann simulation (8)
Enter choice: 4

Data Processing Options
	plot MA (1)
	plot MA with MS (2)
	convert MS files to segmented file type (3)
	histogram and fit pore MA burn data (4)
	embed search tree(s) (5)
	shortest paths (6)
	min cut/max flow (7)
	convert data to/from ascii format (8)
	convert MA list to/from node/path formats (9)
	modify MA (10)
	histogram MA info (11)
	throat calculation (12)
	convert to graph format (13)
	reconstruct burn layers (14)
	MA path curvature and torsion (15)
	maximal balls algorithm (16)
	unpad MA cluster/path files (17)
Enter choice: 12

Throat computation algorithm options
	Dijkstra shortest paths algorithm (1)
	wedge finding algorithm (2)
	subsectional Dijkstra search (3)
Enter choice: 3

Path subsectioning options
	1) Subsections of equal length
	2) Subsections determined by path curvature local maxima
	3) Subsections determined by path torsion   local maxima
	4) Subsections determined by both curv. & tors. local maxima
Enter option: 2

    Files assumed to be labelled  basename.ext,
    basename  is limited to 255 characters maximum,
    ext       is a numerical designator lying between 000 and 999
    It is assumed that the files have consecutively numbered extensions
        ie.  000 -> 056,  or   021 -> 049


Enter basename for burn file(s): ../burn/sw
Are file(s) compressed? [y,n]: y


Resize information selection.
NOTE, row and column numbers begin from 0

For each slice,
   enter first and last column of data to use (x-dir): 0 257
   enter first and last row of data to use (y-dir): 0 257

enter first and last slice of data to use (z-dir): 1 258



Enter basename for singlet loc/burn file(s): ../ma_t/cp_sngl

Enter basename for cluster/path loc/burn file(s): ../ma_t/cp_loc

Enter basename for cluster/path structure file(s): ../ma_t/cp_struct
Are file(s) compressed? [y,n]: y


Enter basename for throat file(s): ../throats/sw_sub
Are throat file(s) to be compressed? [y,n]: y
There are 1816 ma paths. Compute for all? (y(dflt),n): n
Specify range of MA path id numbers
	1) consecutive
	2) non-consecutive
Enter choice: 2
Are path ids(in ascending order) stored in a file(y/n)?: y

Enter basename for MA path ids file(s): ma_no_thr_mrg