-M. Prodanovic, W.B. Lindquist and R. Seright. Residual fluid blobs and contact angle measurements from {X}-ray images of fluid displacement. To be presented at Computational Methods in Water Resources XVI, Copenhagen, Denmark, June 19-22, 2006.

-F.C. Zhou, B. Anthony, K. Dunn, P. Deng, Z. Xu and W.B. Lindquist. Neuroadaptive changes of dendritic spines in nucleus accumbens after chronic alcohol drinking in alcohol-preferring rats. Submitted to J. Neurosci.

- W.B. Lindquist, S. Chung, J. Pinezich, E. Gorin, Y.-X. Qin. Quantifying topological change in bone under uniform erosion. Submitted to Bone. PDF version

- M. Prodanovic, W.B. Lindquist and R.S. Seright. Porous structure and fluid partitioning in polyethylene cores from 3D X-ray microtomographic imaging. J. Colloid Interf. Sci., to appear. PDF version

- W.B. Lindquist. The geometry of primary drainage. J. Colloid Interf. Sci., to appear. PDF version

- R.S. Seright, M. Prodanovic and W.B. Lindquist. X-ray computed microtomography studies of fluid partitioning in drainage and imbibition before and after gel placement: disproportionate permeability reduction. Accepted by SPE Journal. PDF version

- M. Prodanovic, W.B. Lindquist, and R.S. Seright. 3D Image-based characterization of fluid displacement in a Berea core. Accepted by Advances in Water Resources. PDF version

- R.S. Seright, M. Prodanovic, and W.B. Lindquist. X-ray computed microtomography studies of disproportionate permeability reduction. SPE paper #89393, presented at the 14th SPE/DOE Symposium on Improved Oil Recovery, Tulsa, OK, Apr. 17--21, 2004. Word version

- H. Shin, W.B. Lindquist, D.L. Sahagian and S.-R. Song. Analysis of the vesicular structure of basalts. Comput. & Geosci., 31(4) (2005) 473-487. pdf version

- M. Prodanovic, W.B. Lindquist, and R.S. Seright. 3D microtomographic study of fluid displacement in rock cores. Proceedings, Computational Methods in Water Resources XV Conference, Chapel Hill, NC, June 13-17. pdf version

- R.S. Seright, M. Prodanovic, and W.B. Lindquist. X-ray computed microtomography studies of disproportionate permeability reduction. SPE paper #89393, to be presented at the 14th SPE/DOE Symposium on Improved Oil Recovery, Tulsa, OK, Apr. 17-21, 2004. word version

- C.M. Weaver, P.R. Hof, S.L. Wearne and W.B. Lindquist. Automated algorithms for multiscale morphometry of neuronal dendrites. Neural Computation, accepted. pdf version

- M. Maravall, Y.Y. Koh, W.B. Lindquist, and K. Svoboda. Experience-dependent changes in basal dendritic branching of layer 2/3 pyramidal neurons during a critical period for developmental plasticity in rat barrel cortex. Cerebral Cortex, in press.

- A. Kulkarni, J. Gutleber, S. Sampath, W.B. Lindquist, A. Goland, H. Herman, B. Dowd and A.J. Allen. Studies of the microstructure and properties of dense ceramic coatings produced by high-velocity oxygen-fuel combustion spraying. J. Mater. Sci. Engin. A, in press.

- I. Kim, W.B. Lindquist and W.B. Durham. Fracture flow simulation using a finite difference lattice Boltzmann method. Phys. Rev. E.f 67, 046708 (2003). pdf version

- C. M. Weaver, J.D. Pinezich, W.B. Lindquist and M. Vazquez. An algorithm for reconstruction of neurite outgrowth images. J. Neurosci. Meth. 124 (2003) 197-205. pdf version

- K.W. Jones, H. Feng, W.B. Lindquist, P.M. Adler, J.-F. Thovert, B. Vekemans, L. Vincze, I. Szaloki, R. Van Grieken, F. Adams, C. Riekel. Study of the microgeometry of porous materials using synchrotron computed microtomography. In Applications of X-ray Computed Tomography in the Geosciences, F. Mees, R. Swennen, M. Ven Geet, P. Jacobs, eds. Geological Society, London, Special Publications, 215 (2003) 39-49.

- W. Guo, W.B. Lindquist and W. Oh. A parallelized, structured-unstructured hybrid, tetrahedral grid construction. Technical report SUNY-SB-AMS-02-10. pdf version

- R.S. Seright, J. Liang, W.B. Lindquist and J.H. Dunsmuir. Use of X-ray computed microtomography to understand why gels reduce permeability to water more than to oil. J. Petroleum Sci. Eng., 39 (2003) 217-230. pdf version

- S.Y. Cho and W.B. Lindquist. Predictability in Stochastic Reservoirs. Technical report SUNY-SB-AMS-01-21. postscript version

- W.B. Lindquist. Network flow model studies and 3D pore structure. Contemporary Mathematics, 295 (2002) 355-366. pdf version

- W. Hwang and W.B. Lindquist. The 2-dimensional Riemann problem for a 2x2 hyperbolic conservation law I. isotropic media. SIAM J. Math. Anal., 34 (2002) 341-358. pdf version

- W. Hwang and W.B. Lindquist. The 2-dimensional Riemann problem for a 2x2 hyperbolic conservation law II. anisotropic media. SIAM J. Math. Anal. 34 (2002) 359-384. pdf version

- W.B. Lindquist. Quantitative analysis of three dimensional X-ray tomographic images, in Developments in X-ray Tomography III, U. Bonse (ed.), Proceedings of SPIE 4503, 103-115. SPIE, Bellingham, WA, 2002. pdf version

- I.Y.Y. Koh, W.B. Lindquist, K. Zito, E.A. Nimchinsky and K. Svoboda. An Image Analysis Algorithm for the Fine Structure of Neuronal Dendrites. Neural Comput. 14 (2002) 1283-1310. pdf version

- R.S. Seright, J.-T. Liang, W.B. Lindquist, and J.H. Dunsmuir. Characterizing disproportionate permeability reduction using synchrotron X-ray computed microtomography. SPE Reserv. Eval. Eng., 5 (2002) 355-364. pdf version

- C.H. Arns, M.A. Knackstedt, W.V. Pinczewski and W.B. Lindquist. Accurate estimation of transport properties from microtomographic images. Geophys. Res. Lett., 28 (2001) 3361-3364.

- I.Y.Y. Koh and W.B. Lindquist. Automated 3D dendritic spine detection and analysis from two-photon microscopy, in Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing VIII, J.-A. Conchello, C.J. Cogswell and T. Wilson (eds.), Proceedings of SPIE, 4261. SPIE, Bellingham, WA, 2001.

- S.-R. Song, K.W. Jones, W.B. Lindquist, B.A Dowd, and D.L. Sahagian. Synchrotron X-ray computed microtomography (CMT) studies on vesiculated basaltic rocks. Bulletin of Volcanology 63 (2001) 252-263. word version

- H. Yang and W.B. Lindquist. Three-dimensional image analysis of fibrous materials. Applications of Digital Image Processing XXIII, A.G. Tescher (ed.), Proceedings of SPIE 4115, 275-282. SPIE, Bellingham, WA, 2000.

- I.Y.Y. Koh and W.B. Lindquist. 3DMA Dendrite/Spine Detection Users Manual. SUNY-Stony Brook technical report, SUNYSB-AMS-00-03, 2000. postscript version

- R.M. Sok, M.A. Knackstedt, A.P. Sheppard, W.V. Pinczewski, W.B. Lindquist, A. Venkatarangan, L. Paterson. Direct and stochastic generation of network models from tomographic images: Effect of topology on residual saturations. Transport in Porous Media 46 (2002) 345-371.

- W.B. Lindquist, A. Venkatarangan, J. Dunsmuir and T.-f. Wong. Pore and throat size distributions measured from sychrotron X-ray tomographic images of Fontainebleau sandstones. J. Geophys. Research, 105B, (2000) 21508-21528. pdf version

- W.B. Lindquist. 3DMA General Users Manual, SUNY-Stony Brook technical report SUNYSB-AMS-99-20, 1999. postscript version

- J.T. Fredrich, D.R. Noble, R.M. O'Connor, and W.B. Lindquist. Development, implementation, and experimental validation of the lattice Boltzmann method for modeling three-dimensional complex flows. Sandia National Laboratory report SAND99-0369. February, 1999.

- W. Oh and W.B. Lindquist. Image thresholding by indicator kriging, IEEE Trans. Pattern Anal. Mach. Intell., 21, (1999) 590-602. postscript version

- W.B. Lindquist and A. Venkatarangan. Investigating 3D geometry of porous media from high resolution images, Phys. Chem. Earth (A), 25, (1999) 593-599. postscript version

- J.T. Fredrich and W.B. Lindquist. Statistical characterization of the three-dimensional microgeometry of porous media and correlation with macroscopic transport properties, Int. J. Rock Mech. & Min. Sci., 34:3-4, Paper No. 85. (1997).

- Y. Song, W. Chui, J. Glimm, W.B. Lindquist, and F. Tangerman. Applications of front tracking to the simulation of resin transfer molding. Computers and Mathematics with Applications, 33, (1997) 47-60.

- K.-K. Chang and W.B. Lindquist. Mass conserving front tracking for miscible flow, SIAM J. Sci. Comp., 18, (1997) 1310-1327.

- W.B. Lindquist, S.M. Lee, D. Coker, K. Jones and P. Spanne. Medial axis analysis of void structure in three-dimensional tomographic images of porous media. J. Geophys. Res., 101B, (1996) 8297-8310. postscript version

- W.B. Lindquist and Y. Sharma. Confidence estimation in history matched models. SUNY-Stony Brook technical report SUNYSB-AMS-95-10, 1995. postscript version

- P. Spanne, J.F. Thovert, C.J. Jacquin, W.B. Lindquist, K.W. Jones and P.M. Adler, Synchrotron computed microtomography of porous media: topology and transports. Phys. Rev. Lett., 73, (1994) 2001-2004.

- W.B. Lindquist, W. Oh and A. Venkatarangan. A stochastic kriging algorithm. SUNY-Stony Brook technical report SUNYSB-AMS-94-17, 1994. postscript version

- D.A. Coker and W.B. Lindquist. An edge-based algorithm to filter tomographic data sets. SUNY Institute of Technology technical report, SUNYIT-MS-1-1994.

- B. Bielefeld, J. Glimm, W.B. Lindquist, and F. Tangerman. Encorporation of two dimensional front-tracking into PICS GCT 1.0. SUNY-Stony Brook technical report SUNYSB-AMS-93-07, 1993. postscript version

- D. Coker and W.B. Lindquist. Structural reliability analysis for one dimensional, two phase miscible flow. SIAM J. Appl. Math., 54, (1994) 935-953.

- J. Glimm, W.B. Lindquist, F. Pereira and Q. Zhang. A theory of macrodispersion for the scale up problem. Transport in Porous Media, 13, (1993) 97-122.

- J. Glimm and W.B. Lindquist. A theory of fluid mixing. Proceedings of the Fourth International Conference on Hyperbolic Problems, Taormina, Italy, April 1992. Lecture Notes on Numerical Fluid Dynamics, 43 (1993) pp. 291-297, A. Donato, F. Oliveri, eds., Vieweg, Weisbaden.

- L. Fonseca, J. Glimm and W.B. Lindquist. An analysis of field data permeability. SUNY-Stony Brook technical report SUNSYSB-AMS-92-16, 1992. postscript version

- J. Glimm and W.B. Lindquist. Scaling laws for macrodispersion. proceedings of the Ninth International Conference on Computational Methods in Water Resources, Vol. 2: Mathematical Modeling in Water Resources, pp. 35-49. Computational Mechanics Publications, Southampton, UK, 1992.

- J. Glimm, W.B. Lindquist, F. Pereira and R. Peierls. The multi-fractal hypothesis and anomalous diffusion. Revista Brasileira de Matematica Aplicada e Computacional, 11, (1992) 31-49.

- K. W. Jones, P. Spanne, W.B. Lindquist, W. C. Conner and M. Ferrero. Determination of polymerization particle morphology using synchrotron computed microtomography. Nuclear Instruments and Methods in Physics Research, B68 (1992) pp. 105-110.

- W.B. Lindquist. Scale-up in fractal rock. Proceedings of the 7th Wyoming Enhanced Oil Recovery Symposium, Casper, WY, May 1-2, 1991, pp. 139-152; R. E. Ewing and D. Copeland, eds.; Enhanced Oil Recovery Institute, Univ. of Wyoming, Laramie, 1992.

- F. Furtado, J. Glimm, W.B. Lindquist, F. Pereira and Q. Zhang. Time dependent anomalous diffusion for flow in multi-fractal porous media. Lecture Notes in Physics, 398 (1991) pp. 79-89, T. M. M. Verheggan, ed., Springer Verlag, New York.

- F. Furtado, J. Glimm, W.B. Lindquist, and F. Pereira. Characterization of mixing length growth for flow in heterogeneous porous media. SPE paper # 21233, presented at the 11th SPE Symposium on Reservoir Simulation, Anaheim, CA, Feb. 17-21, 1991.

- F. Furtado, J. Glimm, W.B. Lindquist, and F. Pereira. Multi-length scale computations of the mixing length growth in tracer flow. Proceedings of the Emerging Technologies Conference, F. Kovarik, ed., Houston, TX, July 1990.

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. V. Diagrams containing no vacuum polarization loop. Phys. Rev. D, 42, (1990).

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. IV. Vertex diagrams containing photon-photon scattering subdiagrams. Phys. Rev. D, 39, (1989) pp. 2407-2414.

- J. Glimm, W.B. Lindquist, and Q. Zhang. Front tracking, oil reservoirs, engineering scale problems and mass conservation. IMA Vol. Math. Appl. 29, (1991) pp. 123-139.

- Current Progress in Hyperbolic Systems: Riemann Problems and Computations, W. B. Lindquist, ed., AMS Contemporary Math. 100 (1989).

- F. Furtado, J. Glimm, J. Grove, X. L. Li, W.B. Lindquist, R. Menikoff, D. H. Sharp, and Q. Zhang. Front tracking and the interaction of nonlinear hyperbolic waves. Lecture Notes in Engineering, 43, (1989) pp. 99-111.

- W.B. Lindquist. The two dimensional interaction of nonlinear hyperbolic waves: examples from two phase flow in porous media. Proceedings of the 1988 International Conference on Theory and Applications of Differential Equations, R. Aftabizadeh, ed., Ohio University Press, Athens, 1989.

- P. Daripa, J. Glimm, W.B. Lindquist, M. Maesumi, and O. McBryan. On the simulation of heterogeneous petroleum reservoirs. Proceedings of the IMA Workshop on Oil Recovery - Dec. 1987, M. Wheeler, ed., Springer-Verlag, New York, 1988.

- W.B. Lindquist. The scalar Riemann problem in two spatial dimensions: piecewise smoothness of solutions. Proceedings of the Special Session on Nonstrictly Hyperbolic Conservation Laws, Anaheim, 1985. AMS Contemporary Mathematics Series, vol. 60, Jan. 1987.

- P. Daripa, J. Glimm, W.B. Lindquist, and O. McBryan. Polymer floods: a case study of nonlinear wave analysis and of instability in tertiary oil recovery. SIAM J. Appl. Math., 48, (1988) pp. 353-373.

- P. Daripa, J. Glimm, J. Grove, W.B. Lindquist, and O. McBryan. Reservoir simulation by the method of front tracking. Proceedings of the IFE/SSI seminar on Reservoir Description and Simulation with Emphasis on EOR, Oslo, Sept. 1986.

- J. Glimm, J. Grove, W.B. Lindquist, O. McBryan, and G. Tryggvason. The bifurcation of tracked scalar waves. SIAM J. Sci. Stat. Comp., 9, (1988) pp. 61-79.

- J. Glimm, W.B. Lindquist, O. McBryan, and G. Tryggvason. Sharp and diffuse fronts in oil reservoirs: front tracking and capillarity. Proceedings of the SEG/SIAM/SPE Conference on Mathematical and Computational Methods in Seismic Exploration and Reservoir Modeling. January, 1985, Houston.

- M. King, W.B. Lindquist, and L. Reyna. Stability of two dimensional immiscible flow to viscous fingering. DOE Research and Development Report DOE/ER/3077-244, March 1985.

- W.B. Lindquist. Construction of solutions for two dimensional Riemann problems. Int. J. Computers and Appl. Math., 12A, (1986) pp. 615-630.

- W.B. Lindquist. The scalar Riemann problem in two spatial dimensions: piecewise smoothness of solutions and its breakdown. SIAM J. Math. Anal., 17, (1986) pp. 1178-1197.

- T. Kinoshita and W.B. Lindquist. Calculation of the eighth order anomalous magnetic moment of the electron. Precision Measurement and Fundamental Constants II, B. N. Taylor and W. D. Phillips, eds., Natl. Bur. Stand. (U.S.), Spec. Publ. 617 (1984)

- J. Glimm, W.B. Lindquist, O. McBryan, B. Plohr, and S. Yaniv. Front tracking for petroleum reservoir simulation. Proceedings of the Reservoir Simulation Symposium, San Francisco, CA, Nov., 1983. SPE manuscript number 12238.

- J. Glimm, W.B. Lindquist, O. McBryan, and L Padmanabhan. A front tracking reservoir simulator 5-spot validation studies and the coning problem. In The Mathematics of Reservoir Simulation, Frontiers in Applied Mathematics, 1, R.W. Ewing, ed. SIAM, Philadelphia, 1983.

- J. Glimm, E. Isaacson, W.B. Lindquist, O. McBryan, and S. Yaniv. Statistical fluid dynamics II: The influence of geometry on surface instabilities. In The Mathematics of Reservoir Simulation, Frontiers in Applied Mathematics, 1, R.W. Ewing, ed. SIAM, Philadelphia, 1983.

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. V. Diagrams containing no vacuum polarization loop. Cornell preprint CLNS-81/510, 1981.

- T. Kinoshita and W.B. Lindquist, Eighth-order anomalous magnetic moment of the electron. IV. Vertex diagrams containing photon-photon scattering subdiagrams. Cornell preprint CLNS-81/509, 1981.

- T. Kinoshita and W.B. Lindquist, Eighth-order anomalous magnetic moment of the electron. III. Sixth-order vertex containing a second-order vacuum polarization subdiagram. Phys. Rev. D 27, (1983) pp. 886-898.

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. II. Fourth-order vertex containing second- and fourth-order vacuum polarization subdiagrams. Phys. Rev. D 27, (1983) pp. 877-885.

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. I. Second-order vertex containing second- fourth-, and sixth-order vacuum polarization subdiagrams. Phys. Rev. D 27, (1983) pp. 867-876.

- T. Kinoshita and W.B. Lindquist. Parametric formula for the sixth-order vacuum polarization contribution in quantum electrodynamics. Phys. Rev. D 27, (1983) pp. 853-866.

- T. Kinoshita and W.B. Lindquist. Eighth-order anomalous magnetic moment of the electron. Phys. Rev. Lett. 47, (1981) pp. 1573-1576.