****************************************************
Run Stamp  start time       Thu Jun 17 11:39:30 2004
           machine name     bgc126
           operating system Linux
           number of nodes 6
****************************************************

Type debug to Turn On Debugging: debug
Specify Debugging Destination, screen or file: screen
List Functions to Debug - or all -  end  ends list
Names following  all  will not be debugged - end ends
	: new_bdry
	: end
Enter NX: 60
Enter NY: 60
Enter NZ: 60
Enter dx: 0.2
Enter dy: 0.2
Enter dz: 0.2
Enter dt: 0.01
Enter final time: 640
Enter the frequency of states dump for restart: 10000
Enter the frequency of plotting: 1000
Enter intracellular conductivity, (si_x,si_y,si_z): 1 0.081 0.081
Enter extracellular conductivity, (se_x,se_y,se_z): 1 12.4 12.4
Enter the fiber direction of the first layer in degree: 180
Enter the rate of the angle change between layers: 2
Two ionic models are available
	FN       (f)
	FHN-OMER (o)
	3V-SIM   (3)
Enter a model (f(dflt),3): o
Enter the initial value for v: 0
Three problems are available
	Monodomain        (m)
	1d Bidomain       (1)
	2d or 3d Bidomain (b)
Enter a problem (m,1,b(dflt)): b
Enter the resistance: 1
Enter the surface volume ratio: 1
Four solution methods are available.
	Crank_Nicolson (c)
	Semi_Implicit  (i)
	Split_Dense    (s)
	Split_ADI      (t)
Enter a method (c,i,s or t): t
Enter y if you want to turn off bidomain: n
Choose an initial condition.
	Plane Wave starting from left        (p)
	Radial wave starting from a corner   (c)
	Radial wave starting from the center (s)
	Read from a file                     (f)
Enter the choice (p,c,s(default), or f): f
Enter the file name from which you want to read: out/omer2d_plot/states.ts0004000
Do you want to reverse the orientation of the file, Enter y or n(default): n
When the dimension of the init_file is 2, and the simulation dimension is 3,
it needs to know how to fill the 3d volume with the initial wave.
	Stack along z axis           (z)
	Stack along y axis           (y)
	Dimension of init wave is 3. (3)
Enter the choice (z, y, or 3(default)): z
Choose a method for stimulation.
	Cutting half          (h)
	Stimulting the center (c)
	No stimulus           (n)
Enter a method for stimulation (h, c(default), or n): n
t = 0, j = 0
t = 1, j = 100
t = 2, j = 200
t = 3, j = 300
t = 4, j = 400
t = 5, j = 500
t = 6, j = 600
t = 7, j = 700
t = 8, j = 800
t = 9, j = 900
t = 10, j = 1000
t = 11, j = 1100
t = 12, j = 1200
t = 13, j = 1300
t = 14, j = 1400
t = 15, j = 1500
t = 16, j = 1600
t = 17, j = 1700
t = 18, j = 1800
t = 19, j = 1900
t = 20, j = 2000
t = 21, j = 2100
t = 22, j = 2200
t = 23, j = 2300
t = 24, j = 2400
t = 25, j = 2500
t = 26, j = 2600
t = 27, j = 2700
t = 28, j = 2800
t = 29, j = 2900
t = 30, j = 3000
t = 31, j = 3100
t = 32, j = 3200
t = 33, j = 3300
t = 34, j = 3400
t = 35, j = 3500
t = 36, j = 3600
t = 37, j = 3700
t = 38, j = 3800
t = 39, j = 3900
t = 40, j = 4000
t = 41, j = 4100
t = 42, j = 4200
t = 43, j = 4300
t = 44, j = 4400
t = 45, j = 4500
t = 46, j = 4600
t = 47, j = 4700
t = 48, j = 4800
t = 49, j = 4900
t = 50, j = 5000
t = 51, j = 5100
t = 52, j = 5200
t = 53, j = 5300
t = 54, j = 5400
t = 55, j = 5500
t = 56, j = 5600
t = 57, j = 5700
t = 58, j = 5800
t = 59, j = 5900
t = 60, j = 6000
t = 61, j = 6100
t = 62, j = 6200
t = 63, j = 6300
t = 64, j = 6400
t = 65, j = 6500
t = 66, j = 6600
t = 67, j = 6700
t = 68, j = 6800
t = 69, j = 6900
t = 70, j = 7000
t = 71, j = 7100
t = 72, j = 7200
t = 73, j = 7300
t = 74, j = 7400
t = 75, j = 7500
t = 76, j = 7600
t = 77, j = 7700
t = 78, j = 7800
t = 79, j = 7900
t = 80, j = 8000
t = 81, j = 8100
t = 82, j = 8200
t = 83, j = 8300
t = 84, j = 8400
t = 85, j = 8500
t = 86, j = 8600
t = 87, j = 8700
t = 88, j = 8800
t = 89, j = 8900
t = 90, j = 9000
t = 91, j = 9100
t = 92, j = 9200
t = 93, j = 9300
t = 94, j = 9400
t = 95, j = 9500
t = 96, j = 9600
t = 97, j = 9700
t = 98, j = 9800
t = 99, j = 9900
t = 100, j = 10000
t = 101, j = 10100
t = 102, j = 10200
t = 103, j = 10300
t = 104, j = 10400
t = 105, j = 10500
t = 106, j = 10600
t = 107, j = 10700
t = 108, j = 10800
t = 109, j = 10900
t = 110, j = 11000
t = 111, j = 11100
t = 112, j = 11200
t = 113, j = 11300
t = 114, j = 11400
t = 115, j = 11500
t = 116, j = 11600
t = 117, j = 11700
t = 118, j = 11800
t = 119, j = 11900
t = 120, j = 12000
t = 121, j = 12100
t = 122, j = 12200
t = 123, j = 12300
t = 124, j = 12400
t = 125, j = 12500
t = 126, j = 12600
t = 127, j = 12700
t = 128, j = 12800
t = 129, j = 12900
t = 130, j = 13000
t = 131, j = 13100
t = 132, j = 13200
t = 133, j = 13300
t = 134, j = 13400
t = 135, j = 13500
t = 136, j = 13600
t = 137, j = 13700
t = 138, j = 13800
t = 139, j = 13900
t = 140, j = 14000
t = 141, j = 14100
t = 142, j = 14200
t = 143, j = 14300
t = 144, j = 14400
t = 145, j = 14500
t = 146, j = 14600
t = 147, j = 14700
t = 148, j = 14800
t = 149, j = 14900
t = 150, j = 15000
t = 151, j = 15100
t = 152, j = 15200
t = 153, j = 15300
t = 154, j = 15400
t = 155, j = 15500
t = 156, j = 15600
t = 157, j = 15700
t = 158, j = 15800
t = 159, j = 15900
t = 160, j = 16000
t = 161, j = 16100
t = 162, j = 16200
t = 163, j = 16300
t = 164, j = 16400
t = 165, j = 16500
t = 166, j = 16600
t = 167, j = 16700
t = 168, j = 16800
t = 169, j = 16900
t = 170, j = 17000
t = 171, j = 17100
t = 172, j = 17200
t = 173, j = 17300
t = 174, j = 17400
t = 175, j = 17500
t = 176, j = 17600
t = 177, j = 17700
t = 178, j = 17800
t = 179, j = 17900
t = 180, j = 18000
t = 181, j = 18100
t = 182, j = 18200
t = 183, j = 18300
t = 184, j = 18400
t = 185, j = 18500
t = 186, j = 18600
t = 187, j = 18700
t = 188, j = 18800
t = 189, j = 18900
t = 190, j = 19000
t = 191, j = 19100
t = 192, j = 19200
t = 193, j = 19300
t = 194, j = 19400
t = 195, j = 19500
t = 196, j = 19600
t = 197, j = 19700
t = 198, j = 19800
t = 199, j = 19900
t = 200, j = 20000
t = 201, j = 20100
t = 202, j = 20200
t = 203, j = 20300
t = 204, j = 20400
t = 205, j = 20500
t = 206, j = 20600
t = 207, j = 20700
t = 208, j = 20800
t = 209, j = 20900
t = 210, j = 21000
t = 211, j = 21100
t = 212, j = 21200
t = 213, j = 21300
t = 214, j = 21400
t = 215, j = 21500
t = 216, j = 21600
t = 217, j = 21700
t = 218, j = 21800
t = 219, j = 21900
t = 220, j = 22000
t = 221, j = 22100
t = 222, j = 22200
t = 223, j = 22300
t = 224, j = 22400
t = 225, j = 22500
t = 226, j = 22600
t = 227, j = 22700
t = 228, j = 22800
t = 229, j = 22900
t = 230, j = 23000
t = 231, j = 23100
t = 232, j = 23200
t = 233, j = 23300
t = 234, j = 23400
t = 235, j = 23500
t = 236, j = 23600
t = 237, j = 23700
t = 238, j = 23800
t = 239, j = 23900
t = 240, j = 24000
t = 241, j = 24100
t = 242, j = 24200
t = 243, j = 24300
t = 244, j = 24400
t = 245, j = 24500
t = 246, j = 24600
t = 247, j = 24700
t = 248, j = 24800
t = 249, j = 24900
t = 250, j = 25000
t = 251, j = 25100
t = 252, j = 25200
t = 253, j = 25300
t = 254, j = 25400
t = 255, j = 25500
t = 256, j = 25600
t = 257, j = 25700
t = 258, j = 25800
t = 259, j = 25900
t = 260, j = 26000
t = 261, j = 26100
t = 262, j = 26200
t = 263, j = 26300
t = 264, j = 26400
t = 265, j = 26500
t = 266, j = 26600
t = 267, j = 26700
t = 268, j = 26800
t = 269, j = 26900
t = 270, j = 27000
t = 271, j = 27100
t = 272, j = 27200
t = 273, j = 27300
t = 274, j = 27400
t = 275, j = 27500
t = 276, j = 27600
t = 277, j = 27700
t = 278, j = 27800
t = 279, j = 27900
t = 280, j = 28000
t = 281, j = 28100
t = 282, j = 28200
t = 283, j = 28300
t = 284, j = 28400
t = 285, j = 28500
t = 286, j = 28600
t = 287, j = 28700
t = 288, j = 28800
t = 289, j = 28900
t = 290, j = 29000
t = 291, j = 29100
t = 292, j = 29200
t = 293, j = 29300
t = 294, j = 29400
t = 295, j = 29500
t = 296, j = 29600
t = 297, j = 29700
t = 298, j = 29800
t = 299, j = 29900
t = 300, j = 30000
t = 301, j = 30100
t = 302, j = 30200
t = 303, j = 30300
t = 304, j = 30400
t = 305, j = 30500
t = 306, j = 30600
t = 307, j = 30700
t = 308, j = 30800
t = 309, j = 30900
t = 310, j = 31000
t = 311, j = 31100
t = 312, j = 31200
t = 313, j = 31300
t = 314, j = 31400
t = 315, j = 31500
t = 316, j = 31600
t = 317, j = 31700
t = 318, j = 31800
t = 319, j = 31900
t = 320, j = 32000
t = 321, j = 32100
t = 322, j = 32200
t = 323, j = 32300
t = 324, j = 32400
t = 325, j = 32500
t = 326, j = 32600
t = 327, j = 32700
t = 328, j = 32800
t = 329, j = 32900
t = 330, j = 33000
t = 331, j = 33100
t = 332, j = 33200
t = 333, j = 33300
t = 334, j = 33400
t = 335, j = 33500
t = 336, j = 33600
t = 337, j = 33700
t = 338, j = 33800
t = 339, j = 33900
t = 340, j = 34000
t = 341, j = 34100
t = 342, j = 34200
t = 343, j = 34300
t = 344, j = 34400
t = 345, j = 34500
t = 346, j = 34600
t = 347, j = 34700
t = 348, j = 34800
t = 349, j = 34900
t = 350, j = 35000
t = 351, j = 35100
t = 352, j = 35200
t = 353, j = 35300
t = 354, j = 35400
t = 355, j = 35500
t = 356, j = 35600
t = 357, j = 35700
t = 358, j = 35800
t = 359, j = 35900
t = 360, j = 36000
t = 361, j = 36100
t = 362, j = 36200
t = 363, j = 36300
t = 364, j = 36400
t = 365, j = 36500
t = 366, j = 36600
t = 367, j = 36700
t = 368, j = 36800
t = 369, j = 36900
t = 370, j = 37000
t = 371, j = 37100
t = 372, j = 37200
t = 373, j = 37300
t = 374, j = 37400
t = 375, j = 37500
t = 376, j = 37600
t = 377, j = 37700
t = 378, j = 37800
t = 379, j = 37900
t = 380, j = 38000
t = 381, j = 38100
t = 382, j = 38200
t = 383, j = 38300
t = 384, j = 38400
t = 385, j = 38500
t = 386, j = 38600
t = 387, j = 38700
t = 388, j = 38800
t = 389, j = 38900
t = 390, j = 39000
t = 391, j = 39100
t = 392, j = 39200
t = 393, j = 39300
t = 394, j = 39400
t = 395, j = 39500
t = 396, j = 39600
t = 397, j = 39700
t = 398, j = 39800
t = 399, j = 39900
t = 400, j = 40000
t = 401, j = 40100
t = 402, j = 40200
t = 403, j = 40300
t = 404, j = 40400
t = 405, j = 40500
t = 406, j = 40600
t = 407, j = 40700
t = 408, j = 40800
t = 409, j = 40900
t = 410, j = 41000
t = 411, j = 41100
t = 412, j = 41200
t = 413, j = 41300
t = 414, j = 41400
t = 415, j = 41500
t = 416, j = 41600
t = 417, j = 41700
t = 418, j = 41800
t = 419, j = 41900
t = 420, j = 42000
t = 421, j = 42100
t = 422, j = 42200
t = 423, j = 42300
t = 424, j = 42400
t = 425, j = 42500
t = 426, j = 42600
t = 427, j = 42700
t = 428, j = 42800
t = 429, j = 42900
t = 430, j = 43000
t = 431, j = 43100
t = 432, j = 43200
t = 433, j = 43300
t = 434, j = 43400
t = 435, j = 43500
t = 436, j = 43600
t = 437, j = 43700
t = 438, j = 43800
t = 439, j = 43900
t = 440, j = 44000
t = 441, j = 44100
t = 442, j = 44200
t = 443, j = 44300
t = 444, j = 44400
t = 445, j = 44500
t = 446, j = 44600
t = 447, j = 44700
t = 448, j = 44800
t = 449, j = 44900
t = 450, j = 45000
t = 451, j = 45100
t = 452, j = 45200
t = 453, j = 45300
t = 454, j = 45400
t = 455, j = 45500
t = 456, j = 45600
t = 457, j = 45700
t = 458, j = 45800
t = 459, j = 45900
t = 460, j = 46000
t = 461, j = 46100
t = 462, j = 46200
t = 463, j = 46300
t = 464, j = 46400
t = 465, j = 46500
t = 466, j = 46600
t = 467, j = 46700
t = 468, j = 46800
t = 469, j = 46900
t = 470, j = 47000
t = 471, j = 47100
t = 472, j = 47200
t = 473, j = 47300
t = 474, j = 47400
t = 475, j = 47500
t = 476, j = 47600
t = 477, j = 47700
t = 478, j = 47800
t = 479, j = 47900
t = 480, j = 48000
t = 481, j = 48100
t = 482, j = 48200
t = 483, j = 48300
t = 484, j = 48400
t = 485, j = 48500
t = 486, j = 48600
t = 487, j = 48700
t = 488, j = 48800
t = 489, j = 48900
t = 490, j = 49000
t = 491, j = 49100
t = 492, j = 49200
t = 493, j = 49300
t = 494, j = 49400
t = 495, j = 49500
t = 496, j = 49600
t = 497, j = 49700
t = 498, j = 49800
t = 499, j = 49900
t = 500, j = 50000
t = 501, j = 50100
t = 502, j = 50200
t = 503, j = 50300
t = 504, j = 50400
t = 505, j = 50500
t = 506, j = 50600
t = 507, j = 50700
t = 508, j = 50800
t = 509, j = 50900
t = 510, j = 51000
t = 511, j = 51100
t = 512, j = 51200
t = 513, j = 51300
t = 514, j = 51400
t = 515, j = 51500
t = 516, j = 51600
t = 517, j = 51700
t = 518, j = 51800
t = 519, j = 51900
t = 520, j = 52000
t = 521, j = 52100
t = 522, j = 52200
t = 523, j = 52300
t = 524, j = 52400
t = 525, j = 52500
t = 526, j = 52600
t = 527, j = 52700
t = 528, j = 52800
t = 529, j = 52900
t = 530, j = 53000
t = 531, j = 53100
t = 532, j = 53200
t = 533, j = 53300
t = 534, j = 53400
t = 535, j = 53500
t = 536, j = 53600
t = 537, j = 53700
t = 538, j = 53800
t = 539, j = 53900
t = 540, j = 54000
t = 541, j = 54100
t = 542, j = 54200
t = 543, j = 54300
t = 544, j = 54400
t = 545, j = 54500
t = 546, j = 54600
t = 547, j = 54700
t = 548, j = 54800
t = 549, j = 54900
t = 550, j = 55000
t = 551, j = 55100
t = 552, j = 55200
t = 553, j = 55300
t = 554, j = 55400
t = 555, j = 55500
t = 556, j = 55600
t = 557, j = 55700
t = 558, j = 55800
t = 559, j = 55900
t = 560, j = 56000
t = 561, j = 56100
t = 562, j = 56200
t = 563, j = 56300
t = 564, j = 56400
t = 565, j = 56500
t = 566, j = 56600
t = 567, j = 56700
t = 568, j = 56800
t = 569, j = 56900
t = 570, j = 57000
t = 571, j = 57100
t = 572, j = 57200
t = 573, j = 57300
t = 574, j = 57400
t = 575, j = 57500
t = 576, j = 57600
t = 577, j = 57700
t = 578, j = 57800
t = 579, j = 57900
t = 580, j = 58000
t = 581, j = 58100
t = 582, j = 58200
t = 583, j = 58300
t = 584, j = 58400
t = 585, j = 58500
t = 586, j = 58600
t = 587, j = 58700
t = 588, j = 58800
t = 589, j = 58900
t = 590, j = 59000
t = 591, j = 59100
t = 592, j = 59200
t = 593, j = 59300
t = 594, j = 59400
t = 595, j = 59500
t = 596, j = 59600
t = 597, j = 59700
t = 598, j = 59800
t = 599, j = 59900
t = 600, j = 60000
t = 601, j = 60100
t = 602, j = 60200
t = 603, j = 60300
t = 604, j = 60400
t = 605, j = 60500
t = 606, j = 60600
t = 607, j = 60700
t = 608, j = 60800
t = 609, j = 60900
t = 610, j = 61000
t = 611, j = 61100
t = 612, j = 61200
t = 613, j = 61300
t = 614, j = 61400
t = 615, j = 61500
t = 616, j = 61600
t = 617, j = 61700
t = 618, j = 61800
t = 619, j = 61900
t = 620, j = 62000
t = 621, j = 62100
t = 622, j = 62200
t = 623, j = 62300
t = 624, j = 62400
t = 625, j = 62500
t = 626, j = 62600
t = 627, j = 62700
t = 628, j = 62800
t = 629, j = 62900
t = 630, j = 63000
t = 631, j = 63100
t = 632, j = 63200
t = 633, j = 63300
t = 634, j = 63400
t = 635, j = 63500
t = 636, j = 63600
t = 637, j = 63700
t = 638, j = 63800
t = 639, j = 63900
t = 640, j = 64000


	-------- Clock Profile ----------


Commenced  at Thu Jun 17 11:39:30 2004
Terminated at Thu Jun 17 13:00:50 2004
CPU        0 hrs 41 min 34 sec ------> 2494.31 seconds.
Wall clock 1 hrs 21 min 20 sec ------> 4880 seconds.


	-------- Memory Usage -----------
Maximum memory used 0 bytes.
Current memory used 0 bytes.
Destructor for BIDOMAIN_PROBLEM is called.
Destructor for HEART_PROBLEM is called.